EnhancerDB
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  3. rs796793957[chr2:238812169]
Enhancers that have rs796793957[chr2:238812169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796793957[chr2:238812169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238812159 238812174 FOXP1 JASPAR yes 82145372
chr2 238812159 238812180 IRF1 JASPAR yes 82145373
chr2 238812160 238812172 FOXC2 JASPAR yes 82145374
chr2 238812161 238812172 FOXC1 JASPAR yes 82145375
chr2 238812161 238812176 PRDM1 JASPAR yes 82145376
chr2 238812161 238812176 STAT2 JASPAR yes 82145377
chr2 238812162 238812176 STAT1 JASPAR yes 82145379
chr2 238812164 238812179 FOXP1 JASPAR yes 82145380
Genes associated with rs796793957[chr2:238812169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 239152679 239198743 - PER2 ENSG00000132326.7 239198743 340510 Esophagus 0.220389 3304