EnhancerDB
  1. Home
  2. SNP
  3. rs796834539[chr16:88274963]
Enhancers that have rs796834539[chr16:88274963]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs796834539[chr16:88274963]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88273658 88275261 TEF1 GTRD no Bone (Osteoblast) 21735591
chr16 88274701 88275379 ZBTB33 GTRD no Brain (SK-N-SH) 21735594
chr16 88274737 88275417 ZBTB33 GTRD no Brain (SK-N-SH) 21735595
chr16 88274765 88275336 ZBTB33 GTRD no Brain (SK-N-SH) 21735596
chr16 88274961 88274976 FOXP1 JASPAR yes 12269934
chr16 88274962 88274968 TBP TRANSFAC yes 12269935
chr16 88274962 88274977 FOXP1 JASPAR yes 12269936
chr16 88274963 88274978 FOXP1 JASPAR yes 12269937
chr16 88274963 88274984 IRF1 JASPAR yes 12269938
Genes associated with rs796834539[chr16:88274963], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More