EnhancerDB
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  3. rs796864010[chr1:202000336]
Enhancers that have rs796864010[chr1:202000336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs796864010[chr1:202000336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201999254 202000504 ZNF274 GTRD no Cervix (HeLa-S3) 21365456
chr1 201999256 202000428 ZNF143 GTRD no Epithelial (MCF-7) 21365457
chr1 201999525 202000491 ZNF143 GTRD no Epithelial (MCF-7) 21365462
chr1 202000312 202000394 ZNF274 GTRD no Liver (HepG2) 21365490
chr1 202000334 202000349 FOXP1 JASPAR yes 34543598
chr1 202000335 202000350 FOXP1 JASPAR yes 34543599
chr1 202000336 202000351 FOXP1 JASPAR yes 34543600
chr1 202000336 202000357 IRF1 JASPAR yes 34543601
Genes associated with rs796864010[chr1:202000336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More