EnhancerDB
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  3. rs796879328[chr17:53525395]
Enhancers that have rs796879328[chr17:53525395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs796879328[chr17:53525395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53525390 53525406 POU4F2 JASPAR yes 54852151
chr17 53525392 53525396 YY1 TRANSFAC yes 54852152
chr17 53525394 53525404 MEF2A JASPAR yes 54852153
chr17 53525395 53525403 FOXL1 JASPAR yes 54852154
chr17 53525395 53525406 FOXB1 JASPAR yes 54852155
Genes associated with rs796879328[chr17:53525395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More