EnhancerDB
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  3. rs79729349[chr12:47706291]
Enhancers that have rs79729349[chr12:47706291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs79729349[chr12:47706291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47704794 47707293 ZNF274 GTRD no Blood (GM12878) 21543285
chr12 47704833 47707226 ZNF274 GTRD no Blood (GM12878) 21543286
chr12 47704844 47707192 ZNF274 GTRD no Blood (GM12878) 21543287
chr12 47704853 47706497 ZNF143 GTRD no Epithelial (MCF-7) 21543288
chr12 47704854 47706803 ZNF274 GTRD no Blood (GM12878) 21543289
chr12 47704860 47707017 ZNF274 GTRD no Blood (GM12878) 21543290
chr12 47704905 47707265 ZNF274 GTRD no Blood (GM12878) 21543291
chr12 47704942 47706879 ZNF274 GTRD no Blood (GM12878) 21543292
chr12 47704974 47707168 ZNF274 GTRD no Blood (GM12878) 21543293
chr12 47705028 47706950 ZNF274 GTRD no Blood (GM12878) 21543294
chr12 47705100 47706308 ZNF143 GTRD no Epithelial (MCF-7) 21543300
chr12 47705121 47706351 ZNF274 GTRD no Blood (GM12878) 21543301
chr12 47705137 47706999 ZNF274 GTRD no Blood (GM12878) 21543303
chr12 47705143 47707193 ZNF143 GTRD no Epithelial (MCF-7) 21543304
chr12 47705176 47706411 ZNF143 GTRD no Epithelial (MCF-7) 21543305
chr12 47705186 47707250 ZNF143 GTRD no Epithelial (MCF-7) 21543306
chr12 47705188 47706427 ZNF143 GTRD no Epithelial (MCF-7) 21543307
chr12 47705198 47706482 ZNF274 GTRD no Blood (GM12878) 21543308
chr12 47705236 47706336 TCF7L2 GTRD no Colon (HCT116) 21543309
chr12 47705247 47706486 ZNF274 GTRD no Blood (GM12878) 21543310
chr12 47705251 47706495 TCF7L2 GTRD no Colon (HCT116) 21543311
chr12 47705286 47706307 ZNF274 GTRD no Blood (GM12878) 21543313
chr12 47705290 47706488 ZNF274 GTRD no Blood (GM12878) 21543314
chr12 47705295 47706834 ZNF143 GTRD no Epithelial (MCF-7) 21543316
chr12 47705299 47706358 TCF7L2 GTRD no Colon (HCT116) 21543317
chr12 47705342 47706300 ZNF274 GTRD no Blood (GM12878) 21543319
chr12 47705354 47706324 ZNF143 GTRD no Epithelial (MCF-7) 21543326
chr12 47705363 47706390 TCF7L2 GTRD no Colon (HCT116) 21543328
chr12 47705371 47706469 TCF7L2 GTRD no Colon (HCT116) 21543329
chr12 47705373 47706376 ZNF143 GTRD no Epithelial (MCF-7) 21543330
chr12 47705378 47706431 ZNF274 GTRD no Blood (GM12878) 21543331
chr12 47705378 47706905 ZNF274 GTRD no Blood (GM12878) 21543332
chr12 47705381 47706557 ZNF143 GTRD no Epithelial (MCF-7) 21543333
chr12 47705394 47706388 ZNF274 GTRD no Blood (GM12878) 21543337
chr12 47705395 47706807 ZNF274 GTRD no Blood (GM12878) 21543338
chr12 47705408 47706293 ZNF274 GTRD no Blood (GM12878) 21543342
chr12 47705414 47706306 ZNF274 GTRD no Blood (GM12878) 21543344
chr12 47705417 47706329 ZNF274 GTRD no Blood (GM12878) 21543345
chr12 47705424 47706372 ZNF274 GTRD no Blood (GM12878) 21543346
chr12 47705450 47706339 ZNF274 GTRD no Blood (GM12878) 21543347
chr12 47705497 47706304 ZNF143 GTRD no Epithelial (MCF-7) 21543352
chr12 47705516 47707058 ZNF274 GTRD no Blood (GM12878) 21543353
chr12 47705527 47706296 ZNF274 GTRD no Blood (GM12878) 21543355
chr12 47705560 47706606 ZNF274 GTRD no Blood (GM12878) 21543358
chr12 47705584 47706736 ZNF143 GTRD no Epithelial (MCF-7) 21543359
chr12 47705607 47706559 ZNF274 GTRD no Blood (GM12878) 21543360
chr12 47705644 47706524 ZNF143 GTRD no Epithelial (MCF-7) 21543361
chr12 47705652 47706297 ZNF274 GTRD no Blood (GM12878) 21543362
chr12 47705689 47706366 ZNF274 GTRD no Blood (GM12878) 21543366
chr12 47705779 47706930 ZNF274 GTRD no Blood (GM12878) 21543369
chr12 47705787 47706377 ZNF274 GTRD no Blood (GM12878) 21543370
chr12 47705792 47706402 ZNF143 GTRD no Epithelial (MCF-7) 21543371
chr12 47705801 47706394 ZNF274 GTRD no Blood (GM12878) 21543372
chr12 47705833 47706994 ZNF274 GTRD no Blood (GM12878) 21543373
chr12 47705848 47706928 ZNF274 GTRD no Blood (GM12878) 21543375
chr12 47705852 47706702 ZNF274 GTRD no Blood (GM12878) 21543376
chr12 47705863 47706340 ZNF143 GTRD no Epithelial (MCF-7) 21543377
chr12 47705875 47706952 ZNF274 GTRD no Blood (GM12878) 21543378
chr12 47705880 47706498 ZNF143 GTRD no Epithelial (MCF-7) 21543379
chr12 47705889 47707075 ZNF274 GTRD no Blood (GM12878) 21543380
chr12 47705928 47706933 ZNF274 GTRD no Blood (GM12878) 21543382
chr12 47706052 47706500 ZNF143 GTRD no Epithelial (MCF-7) 21543383
chr12 47706094 47706555 ZNF143 GTRD no Epithelial (MCF-7) 21543385
chr12 47706284 47706305 REST JASPAR yes 120695845
Genes associated with rs79729349[chr12:47706291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More