EnhancerDB
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  3. rs79764786[chr1:228960882]
Enhancers that have rs79764786[chr1:228960882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs79764786[chr1:228960882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228960879 228960889 GSX1 JASPAR yes 35932273
chr1 228960879 228960889 GSX2 JASPAR yes 35932274
chr1 228960880 228960888 LMX1A JASPAR yes 35932275
chr1 228960880 228960888 LMX1B JASPAR yes 35932276
chr1 228960880 228960888 NKX6-1 JASPAR yes 35932277
chr1 228960880 228960888 NKX6-2 JASPAR yes 35932278
chr1 228960880 228960888 VAX1 JASPAR yes 35932279
chr1 228960880 228960888 VAX2 JASPAR yes 35932280
chr1 228960880 228960888 VSX1 JASPAR yes 35932281
chr1 228960880 228960888 VSX2 JASPAR yes 35932282
Genes associated with rs79764786[chr1:228960882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More