EnhancerDB
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  3. rs7977569[chr12:55325045]
Enhancers that have rs7977569[chr12:55325045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 55324545 55336755 enh29581
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs7977569[chr12:55325045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 55325042 55325052 ALX3 JASPAR yes 121060119
chr12 55325042 55325052 GSX2 JASPAR yes 121060120
chr12 55325042 55325052 LBX2 JASPAR yes 121060121
chr12 55325042 55325052 MIXL1 JASPAR yes 121060122
chr12 55325043 55325047 H1TF2 TRANSFAC yes 121060123
chr12 55325043 55325047 NFE TRANSFAC yes 121060124
chr12 55325043 55325047 SRF TRANSFAC yes 121060125
chr12 55325043 55325051 BARX1 JASPAR yes 121060126
chr12 55325043 55325051 BSX JASPAR yes 121060127
chr12 55325043 55325051 EN1 JASPAR yes 121060128
chr12 55325043 55325051 ISX JASPAR yes 121060129
chr12 55325043 55325051 LHX9 JASPAR yes 121060130
chr12 55325043 55325051 MSX1 JASPAR yes 121060131
chr12 55325043 55325051 MSX2 JASPAR yes 121060132
chr12 55325043 55325051 PRRX1 JASPAR yes 121060133
chr12 55325043 55325051 RAX2 JASPAR yes 121060134
chr12 55325043 55325051 SHOX JASPAR yes 121060135
Genes associated with rs7977569[chr12:55325045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More