EnhancerDB
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  3. rs79876540[chr1:203236662]
Enhancers that have rs79876540[chr1:203236662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203230551 203240576 enh880
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs79876540[chr1:203236662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203236647 203236662 HNF4A JASPAR yes 34611550
chr1 203236648 203236662 NR2F1 JASPAR yes 34611551
chr1 203236648 203236663 HNF4G JASPAR yes 34611552
chr1 203236656 203236670 ZIC1 JASPAR yes 34611553
chr1 203236656 203236671 ZIC3 JASPAR yes 34611554
chr1 203236656 203236671 ZIC4 JASPAR yes 34611555
Genes associated with rs79876540[chr1:203236662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More