EnhancerDB
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  3. rs79919770[chr1:212660322]
Enhancers that have rs79919770[chr1:212660322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs79919770[chr1:212660322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212659904 212660584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378887
chr1 212659912 212660422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378888
chr1 212660317 212660332 HNF1A JASPAR yes 35129151
Genes associated with rs79919770[chr1:212660322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 211836114 211848960 - NEK2 ENSG00000117650.8 211848960 811362 Thyroid 0.0697293 1821