EnhancerDB
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  3. rs79920943[chr1:230223419]
Enhancers that have rs79920943[chr1:230223419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79920943[chr1:230223419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230223401 230223422 REST JASPAR yes 36020134
chr1 230223402 230223421 REST JASPAR yes 36020135
chr1 230223411 230223423 TAL1 JASPAR yes 36020138
chr1 230223413 230223423 FIGLA JASPAR yes 36020139
chr1 230223413 230223423 MSC JASPAR yes 36020140
chr1 230223413 230223423 MYF6 JASPAR yes 36020141
chr1 230223413 230223423 TFAP4 JASPAR yes 36020142
chr1 230223413 230223425 TAL1 JASPAR yes 36020143
Genes associated with rs79920943[chr1:230223419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More