EnhancerDB
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  3. rs79928057[chr17:70408225]
Enhancers that have rs79928057[chr17:70408225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79928057[chr17:70408225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70407886 70408311 ZNF143 GTRD no Epithelial (MCF-7) 21784779
chr17 70408217 70408235 NR3C1 JASPAR yes 55784919
chr17 70408218 70408229 GCM1 JASPAR yes 55784920
Genes associated with rs79928057[chr17:70408225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More