EnhancerDB
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  3. rs79961287[chr17:39820286]
Enhancers that have rs79961287[chr17:39820286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs79961287[chr17:39820286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39820264 39822656 ZNF274 GTRD no Blood (GM12878) 21758084
chr17 39820264 39822656 ZNF274 GTRD no Blood (GM12878) 108259245
chr17 39820276 39820290 PLAG1 JASPAR yes 54270159
chr17 39820277 39820294 RARA JASPAR yes 54270160
chr17 39820277 39820294 RXRA JASPAR yes 54270161
chr17 39820278 39820293 SCRT1 JASPAR yes 54270163
chr17 39820278 39820293 ZIC3 JASPAR yes 54270164
chr17 39820278 39820293 ZIC4 JASPAR yes 54270165
chr17 39820279 39820293 ZIC1 JASPAR yes 54270166
Genes associated with rs79961287[chr17:39820286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More