EnhancerDB
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  3. rs79980588[chr6:110858269]
Enhancers that have rs79980588[chr6:110858269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79980588[chr6:110858269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110858258 110858272 FOXF2 JASPAR yes 104295405
chr6 110858260 110858272 FOXC2 JASPAR yes 104295406
chr6 110858261 110858272 FOXP2 JASPAR yes 104295407
chr6 110858262 110858270 FOXO3 JASPAR yes 104295408
chr6 110858263 110858270 FOXD2 JASPAR yes 104295409
chr6 110858263 110858270 FOXI1 JASPAR yes 104295410
chr6 110858263 110858270 FOXL1 JASPAR yes 104295411
chr6 110858263 110858270 FOXO4 JASPAR yes 104295412
chr6 110858263 110858270 FOXO6 JASPAR yes 104295413
chr6 110858263 110858270 FOXP3 JASPAR yes 104295414
chr6 110858263 110858271 FOXD1 JASPAR yes 104295415
chr6 110858263 110858271 FOXG1 JASPAR yes 104295416
chr6 110858263 110858271 FOXO3 JASPAR yes 104295417
chr6 110858268 110858272 YY1 TRANSFAC yes 104295418
chr6 110858268 110858282 POU4F1 JASPAR yes 104295419
Genes associated with rs79980588[chr6:110858269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More