EnhancerDB
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  3. rs80021889[chr5:171861638]
Enhancers that have rs80021889[chr5:171861638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs80021889[chr5:171861638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171861622 171861643 IRF1 JASPAR yes 67789628
chr5 171861628 171861649 IRF1 JASPAR yes 67789629
chr5 171861630 171861645 PRDM1 JASPAR yes 67789630
chr5 171861635 171861640 ETS2 TRANSFAC yes 67789631
Genes associated with rs80021889[chr5:171861638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More