EnhancerDB
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  3. rs80087906[chr16:390036]
Enhancers that have rs80087906[chr16:390036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs80087906[chr16:390036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 389604 390120 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683989
chr16 389604 390120 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108170426
chr16 389643 390173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683990
chr16 389643 390173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108170427
chr16 389757 390047 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21683991
chr16 389757 390047 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108170428
chr16 390017 390038 IRF1 JASPAR yes 9107082
chr16 390021 390042 IRF1 JASPAR yes 9107086
chr16 390021 390042 ZNF263 JASPAR yes 9107087
chr16 390022 390037 FOXP1 JASPAR yes 9107088
chr16 390022 390043 ZNF263 JASPAR yes 9107089
chr16 390024 390045 ZNF263 JASPAR yes 9107090
chr16 390025 390046 ZNF263 JASPAR yes 9107091
chr16 390027 390048 IRF1 JASPAR yes 9107092
chr16 390027 390048 ZNF263 JASPAR yes 9107093
chr16 390028 390049 ZNF263 JASPAR yes 9107094
chr16 390030 390051 IRF1 JASPAR yes 9107095
chr16 390030 390051 ZNF263 JASPAR yes 9107096
chr16 390031 390052 ZNF263 JASPAR yes 9107097
chr16 390033 390054 IRF1 JASPAR yes 9107098
chr16 390034 390055 ZNF263 JASPAR yes 9107099
chr16 390036 390057 IRF1 JASPAR yes 9107100
Genes associated with rs80087906[chr16:390036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More