EnhancerDB
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  3. rs80100241[chr17:80466565]
Enhancers that have rs80100241[chr17:80466565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs80100241[chr17:80466565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80465637 80466835 ZNF143 GTRD no Epithelial (MCF-7) 21800708
chr17 80465648 80466877 ZNF143 GTRD no Epithelial (MCF-7) 21800710
chr17 80466185 80466900 TCF7L2 GTRD no Colon (HCT116) 21800713
chr17 80466220 80466881 ZNF143 GTRD no Epithelial (MCF-7) 21800715
chr17 80466235 80466903 TCF7L2 GTRD no Colon (HCT116) 21800716
chr17 80466540 80466887 TCF7L2 GTRD no Colon (HCT116) 21800719
chr17 80466561 80466570 SNAI2 JASPAR yes 56369441
chr17 80466561 80466571 ID4 JASPAR yes 56369442
chr17 80466565 80466582 RXRA JASPAR yes 56369443
Genes associated with rs80100241[chr17:80466565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More