EnhancerDB
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  3. rs80123539[chr1:228963525]
Enhancers that have rs80123539[chr1:228963525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs80123539[chr1:228963525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228963517 228963532 HNF1A JASPAR yes 35932659
chr1 228963519 228963528 SOX9 JASPAR yes 35932660
chr1 228963521 228963530 SRY JASPAR yes 35932661
chr1 228963524 228963536 HNF1B JASPAR yes 35932662
Genes associated with rs80123539[chr1:228963525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More