EnhancerDB
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  3. rs80130411[chr1:25014660]
Enhancers that have rs80130411[chr1:25014660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs80130411[chr1:25014660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25014650 25014660 SP1 JASPAR yes 27518332
chr1 25014652 25014664 INSM1 JASPAR yes 27518334
chr1 25014656 25014671 NR2C2 JASPAR yes 27518335
chr1 25014657 25014671 RXRB JASPAR yes 27518336
chr1 25014657 25014671 RXRG JASPAR yes 27518337
Genes associated with rs80130411[chr1:25014660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More