EnhancerDB
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  3. rs80135353[chr1:230224644]
Enhancers that have rs80135353[chr1:230224644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs80135353[chr1:230224644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230224637 230224647 MYF6 JASPAR yes 36020322
chr1 230224639 230224644 MYC TRANSFAC yes 36020323
chr1 230224642 230224656 SPI1 JASPAR yes 36020324
Genes associated with rs80135353[chr1:230224644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More