EnhancerDB
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  3. rs80179824[chr5:171865384]
Enhancers that have rs80179824[chr5:171865384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs80179824[chr5:171865384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171865373 171865386 TFAP2A JASPAR yes 67790092
chr5 171865373 171865386 TFAP2B JASPAR yes 67790093
chr5 171865373 171865386 TFAP2C JASPAR yes 67790094
chr5 171865373 171865388 TFAP2C JASPAR yes 67790095
chr5 171865374 171865385 EBF1 JASPAR yes 67790096
chr5 171865381 171865385 LFA1 TRANSFAC yes 67790097
Genes associated with rs80179824[chr5:171865384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More