EnhancerDB
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  3. rs80219380[chr17:79696478]
Enhancers that have rs80219380[chr17:79696478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs80219380[chr17:79696478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79695455 79696490 ZNF143 GTRD no Epithelial (MCF-7) 21798295
chr17 79696055 79697711 TCF7L2 GTRD no Colon (HCT116) 21798304
chr17 79696070 79696577 TCF7L2 GTRD no Colon (HCT116) 21798305
chr17 79696471 79696482 PHOX2A JASPAR yes 56340163
chr17 79696471 79696482 PROP1 JASPAR yes 56340164
chr17 79696476 79696487 PHOX2A JASPAR yes 56340165
chr17 79696476 79696487 PROP1 JASPAR yes 56340166
chr17 79696477 79696492 MEF2A JASPAR yes 56340167
chr17 79696478 79696490 FOXI1 JASPAR yes 56340168
chr17 79696478 79696493 FOXP1 JASPAR yes 56340169
chr17 79696478 79696493 MEF2C JASPAR yes 56340170
Genes associated with rs80219380[chr17:79696478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More