EnhancerDB
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  3. rs80227496[chr1:154809413]
Enhancers that have rs80227496[chr1:154809413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs80227496[chr1:154809413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154809411 154809425 TLX1 JASPAR yes 32316727
chr1 154809412 154809426 TLX1 JASPAR yes 32316728
Genes associated with rs80227496[chr1:154809413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More