EnhancerDB
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  3. rs80242345[chr12:110549564]
Enhancers that have rs80242345[chr12:110549564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs80242345[chr12:110549564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110549071 110549687 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572657
chr12 110549117 110549661 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572658
chr12 110549220 110549620 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572662
chr12 110549227 110549617 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572663
chr12 110549234 110549614 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572664
chr12 110549243 110549583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572665
chr12 110549266 110549569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572667
chr12 110549553 110549564 FOXP2 JASPAR yes 123677279
chr12 110549558 110549565 E2F1 TRANSFAC yes 123677281
chr12 110549558 110549566 E2F1 JASPAR yes 123677282
chr12 110549559 110549569 GCM2 JASPAR yes 123677283
Genes associated with rs80242345[chr12:110549564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More