EnhancerDB
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  3. rs80283090[chr17:39829027]
Enhancers that have rs80283090[chr17:39829027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs80283090[chr17:39829027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39828425 39829096 ZNF274 GTRD no Liver (HepG2) 108259478
chr17 39828483 39829040 ZNF274 GTRD no Liver (HepG2) 108259479
chr17 39828496 39829096 ZNF274 GTRD no Liver (HepG2) 108259480
chr17 39829027 39829046 PAX5 JASPAR yes 54271475
Genes associated with rs80283090[chr17:39829027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More