EnhancerDB
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  3. rs80288834[chr6:35368602]
Enhancers that have rs80288834[chr6:35368602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35351436 35372635 enh23176
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs80288834[chr6:35368602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35368581 35368602 IRF1 JASPAR yes 101281844
chr6 35368583 35368604 IRF1 JASPAR yes 101281846
chr6 35368587 35368602 PRDM1 JASPAR yes 101281847
chr6 35368600 35368604 TEAD2 TRANSFAC yes 101281848
chr6 35368600 35368610 NKX2-3 JASPAR yes 101281849
chr6 35368601 35368610 NKX3-2 JASPAR yes 101281850
Genes associated with rs80288834[chr6:35368602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More