EnhancerDB
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  3. rs80304939[chr1:172609579]
Enhancers that have rs80304939[chr1:172609579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs80304939[chr1:172609579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172608956 172610420 ZBTB33 GTRD no Lung (A549) 21350130
chr1 172609018 172610458 ZBTB33 GTRD no Lung (A549) 21350131
chr1 172609220 172611183 ZNF274 GTRD no Bone Marrow (K562) 21350132
chr1 172609361 172609751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350133
chr1 172609378 172610074 ZNF274 GTRD no Bone Marrow (K562) 21350134
chr1 172609379 172610099 ZNF274 GTRD no Bone Marrow (K562) 21350135
chr1 172609385 172610247 ZNF274 GTRD no Bone Marrow (K562) 21350136
chr1 172609391 172609975 ZNF274 GTRD no Bone Marrow (K562) 21350137
chr1 172609400 172610028 ZNF274 GTRD no Bone Marrow (K562) 21350138
chr1 172609401 172609950 CTCF GTRD no Spleen 21350139
chr1 172609408 172610075 ZBTB33 GTRD no Lung (A549) 21350140
chr1 172609442 172610027 ZBTB33 GTRD no Lung (A549) 21350141
chr1 172609457 172610179 ZBTB33 GTRD no Lung (A549) 21350142
chr1 172609463 172609993 ZNF274 GTRD no Bone Marrow (K562) 21350143
chr1 172609568 172609586 TP53 JASPAR yes 33142534
Genes associated with rs80304939[chr1:172609579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More