EnhancerDB
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  3. rs80325860[chr12:47711661]
Enhancers that have rs80325860[chr12:47711661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs80325860[chr12:47711661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47711660 47711676 RFX2 JASPAR yes 120696930
chr12 47711660 47711676 RFX3 JASPAR yes 120696931
chr12 47711660 47711676 RFX4 JASPAR yes 120696932
chr12 47711660 47711676 RFX5 JASPAR yes 120696933
Genes associated with rs80325860[chr12:47711661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More