EnhancerDB
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  3. rs80335009[chr18:55904453]
Enhancers that have rs80335009[chr18:55904453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs80335009[chr18:55904453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55904446 55904457 E2F4 JASPAR yes 110930987
chr18 55904448 55904458 SP1 JASPAR yes 110930988
chr18 55904449 55904455 SP1 TRANSFAC yes 110930989
chr18 55904449 55904459 SP1 JASPAR yes 110930990
chr18 55904450 55904457 SP1 TRANSFAC yes 110930991
chr18 55904451 55904456 SP1 TRANSFAC yes 110930992
chr18 55904451 55904457 SP1 TRANSFAC yes 110930993
chr18 55904451 55904458 SP1 TRANSFAC yes 110930994
chr18 55904451 55904467 GLIS1 JASPAR yes 110930995
chr18 55904452 55904462 ZNF740 JASPAR yes 110930996
chr18 55904452 55904466 GLIS2 JASPAR yes 110930997
chr18 55904452 55904466 GLIS3 JASPAR yes 110930998
Genes associated with rs80335009[chr18:55904453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More