EnhancerDB
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  3. rs80341302[chr12:96627198]
Enhancers that have rs80341302[chr12:96627198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 96627063 96627293 vista14555
VISTA
Transcript factors that have rs80341302[chr12:96627198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96627196 96627212 RFX2 JASPAR yes 82460732
chr12 96627196 96627212 RFX3 JASPAR yes 82460733
chr12 96627196 96627212 RFX4 JASPAR yes 82460734
chr12 96627196 96627212 RFX5 JASPAR yes 82460735
chr12 96627196 96627212 RFX2 JASPAR yes 123051035
chr12 96627196 96627212 RFX3 JASPAR yes 123051036
chr12 96627196 96627212 RFX4 JASPAR yes 123051037
chr12 96627196 96627212 RFX5 JASPAR yes 123051038
chr12 96627197 96627216 RFX2 JASPAR yes 82460736
chr12 96627197 96627216 RFX2 JASPAR yes 123051039
Genes associated with rs80341302[chr12:96627198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More