EnhancerDB
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  3. rs8073284[chr17:39819315]
Enhancers that have rs8073284[chr17:39819315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs8073284[chr17:39819315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39819313 39819334 IRF1 JASPAR yes 54270008
chr17 39819315 39819330 PRDM1 JASPAR yes 54270009
chr17 39819315 39819336 IRF1 JASPAR yes 54270010
Genes associated with rs8073284[chr17:39819315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 40340817 40346531 - GHDC ENSG00000167925.11 40346531 521502 Liver 0.25973 15857