EnhancerDB
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  3. rs8078642[chr17:79400242]
Enhancers that have rs8078642[chr17:79400242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs8078642[chr17:79400242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309627
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309628
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309629
chr17 79399625 79400433 TCF7L2 GTRD no Colon (HCT116) 21797982
chr17 79399625 79400433 TCF7L2 GTRD no Colon (HCT116) 108309630
chr17 79399625 79400433 TCF7L2 GTRD no Colon (HCT116) 108309631
chr17 79400232 79401785 ZBTB33 GTRD no Lung (A549) 108309632
chr17 79400239 79400244 SP1 TRANSFAC yes 56327372
chr17 79400239 79400245 SP1 TRANSFAC yes 56327373
Genes associated with rs8078642[chr17:79400242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 79890260 79900288 - PYCR1 ENSG00000183010.12 79900288 490018 Pancreas 0.0373062 16375