EnhancerDB
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  3. rs8078838[chr17:80257621]
Enhancers that have rs8078838[chr17:80257621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs8078838[chr17:80257621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 21799382
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 108311917
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 21799383
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 108311918
chr17 80256422 80258239 ZBTB33 GTRD no Lung (A549) 108311920
chr17 80257134 80257692 ZNF274 GTRD no Bone Marrow (K562) 21799396
chr17 80257135 80257690 ZNF274 GTRD no Bone Marrow (K562) 21799397
chr17 80257182 80258247 ZNF274 GTRD no Bone Marrow (K562) 21799398
chr17 80257185 80257688 ZNF274 GTRD no Cervix (HeLa-S3) 21799399
chr17 80257307 80258344 ZNF274 GTRD no Cervix (HeLa-S3) 21799402
chr17 80257330 80258095 ZNF274 GTRD no Bone Marrow (K562) 21799403
chr17 80257342 80258069 ZNF274 GTRD no Blood (GM12878) 21799404
chr17 80257344 80257648 ZNF274 GTRD no Cervix (HeLa-S3) 21799405
chr17 80257533 80258246 ZNF274 GTRD no Bone Marrow (K562) 21799406
chr17 80257541 80258118 ZNF274 GTRD no Bone Marrow (K562) 21799407
chr17 80257593 80258266 ZNF274 GTRD no Bone Marrow (K562) 21799408
chr17 80257597 80258074 ZNF143 GTRD no Epithelial (MCF-7) 21799409
chr17 80257617 80257622 SP1 TRANSFAC yes 56360094
Genes associated with rs8078838[chr17:80257621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More