EnhancerDB
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  3. rs8079341[chr17:70369291]
Enhancers that have rs8079341[chr17:70369291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs8079341[chr17:70369291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70369066 70369883 ZNF143 GTRD no Epithelial (MCF-7) 21784360
chr17 70369136 70369943 ZNF274 GTRD no Cervix (HeLa-S3) 21784361
chr17 70369199 70369943 ZNF274 GTRD no Cervix (HeLa-S3) 21784362
chr17 70369225 70369800 ZNF143 GTRD no Epithelial (MCF-7) 21784363
chr17 70369233 70369747 ZNF143 GTRD no Epithelial (MCF-7) 21784364
chr17 70369241 70369927 ZNF143 GTRD no Epithelial (MCF-7) 21784365
chr17 70369288 70369296 TBX5 JASPAR yes 55779307
chr17 70369288 70369297 ZEB1 JASPAR yes 55779308
chr17 70369288 70369303 SCRT1 JASPAR yes 55779309
chr17 70369289 70369299 FIGLA JASPAR yes 55779310
chr17 70369289 70369299 ID4 JASPAR yes 55779311
chr17 70369289 70369299 TCF3 JASPAR yes 55779312
chr17 70369289 70369299 TCF4 JASPAR yes 55779313
chr17 70369290 70369299 SNAI2 JASPAR yes 55779314
chr17 70369291 70369296 USF2 TRANSFAC yes 55779315
Genes associated with rs8079341[chr17:70369291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More