EnhancerDB
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  3. rs820130[chr17:73669130]
Enhancers that have rs820130[chr17:73669130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73668800 73695855 enh17379
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs820130[chr17:73669130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73669121 73669131 ALX3 JASPAR yes 55965098
chr17 73669121 73669131 ESX1 JASPAR yes 55965099
chr17 73669121 73669131 GSX1 JASPAR yes 55965100
chr17 73669121 73669131 GSX2 JASPAR yes 55965101
chr17 73669121 73669131 LBX2 JASPAR yes 55965102
chr17 73669121 73669131 MIXL1 JASPAR yes 55965103
chr17 73669121 73669131 RAX JASPAR yes 55965104
chr17 73669122 73669130 BARX1 JASPAR yes 55965108
chr17 73669122 73669130 BSX JASPAR yes 55965109
chr17 73669122 73669130 DLX6 JASPAR yes 55965110
chr17 73669122 73669130 ISX JASPAR yes 55965111
chr17 73669122 73669130 LBX1 JASPAR yes 55965112
chr17 73669122 73669130 LHX9 JASPAR yes 55965113
chr17 73669122 73669130 MSX1 JASPAR yes 55965114
chr17 73669122 73669130 MSX2 JASPAR yes 55965115
chr17 73669122 73669130 NKX6-2 JASPAR yes 55965116
chr17 73669122 73669130 PRRX1 JASPAR yes 55965117
chr17 73669122 73669130 RAX2 JASPAR yes 55965118
chr17 73669122 73669130 SHOX JASPAR yes 55965119
chr17 73669122 73669130 UNCX JASPAR yes 55965120
chr17 73669122 73669132 HOXA13 JASPAR yes 55965121
chr17 73669122 73669132 HOXB13 JASPAR yes 55965122
chr17 73669122 73669132 HOXD13 JASPAR yes 55965123
Genes associated with rs820130[chr17:73669130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More