EnhancerDB
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Enhancers that have rs833480[chr12:49278861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49273705 49285739 enh29564
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs833480[chr12:49278861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 21544296
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029562
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029563
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 21544311
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029576
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029577
chr12 49278741 49279441 ZNF143 GTRD no Epithelial (MCF-7) 21544348
chr12 49278754 49279195 ZNF143 GTRD no Epithelial (MCF-7) 21544349
chr12 49278766 49279343 ZNF143 GTRD no Epithelial (MCF-7) 21544350
chr12 49278769 49279418 ZNF143 GTRD no Epithelial (MCF-7) 21544351
chr12 49278780 49279269 ZNF143 GTRD no Epithelial (MCF-7) 21544352
chr12 49278780 49279343 ZNF143 GTRD no Epithelial (MCF-7) 21544353
chr12 49278787 49279049 ZNF143 GTRD no Epithelial (MCF-7) 21544354
chr12 49278796 49279231 ZNF143 GTRD no Epithelial (MCF-7) 21544355
chr12 49278797 49279288 ZNF143 GTRD no Epithelial (MCF-7) 21544356
chr12 49278798 49279221 ZNF143 GTRD no Epithelial (MCF-7) 21544357
chr12 49278802 49279144 ZNF143 GTRD no Epithelial (MCF-7) 21544358
chr12 49278806 49279073 ZNF143 GTRD no Epithelial (MCF-7) 21544359
chr12 49278818 49279049 ZNF143 GTRD no Epithelial (MCF-7) 21544360
chr12 49278824 49279109 ZNF143 GTRD no Epithelial (MCF-7) 21544361
chr12 49278841 49278862 IRF1 JASPAR yes 120753287
chr12 49278861 49278882 IRF1 JASPAR yes 120753289
Genes associated with rs833480[chr12:49278861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More