EnhancerDB
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  3. rs837954[chr12:125097634]
Enhancers that have rs837954[chr12:125097634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125086525 125100115 enh2675
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs837954[chr12:125097634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125096792 125097934 ZNF143 GTRD no Epithelial (MCF-7) 21581303
chr12 125096887 125098131 ZNF143 GTRD no Epithelial (MCF-7) 21581304
chr12 125097464 125098015 TCF7L2 GTRD no Colon (HCT116) 21581307
chr12 125097476 125097843 TCF7L2 GTRD no Colon (HCT116) 21581308
chr12 125097478 125097997 TCF7L2 GTRD no Colon (HCT116) 21581309
chr12 125097590 125097930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581310
chr12 125097628 125097634 TFIID TRANSFAC yes 124398885
chr12 125097632 125097647 RUNX2 JASPAR yes 124398886
chr12 125097633 125097642 RUNX2 JASPAR yes 124398887
chr12 125097633 125097643 RUNX3 JASPAR yes 124398888
chr12 125097633 125097644 RUNX1 JASPAR yes 124398889
Genes associated with rs837954[chr12:125097634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More