EnhancerDB
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  3. rs853560[chr6:110863247]
Enhancers that have rs853560[chr6:110863247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs853560[chr6:110863247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110863238 110863250 HNF1B JASPAR yes 104296069
chr6 110863244 110863248 YY1 TRANSFAC yes 104296070
chr6 110863244 110863252 HOXA5 JASPAR yes 104296071
Genes associated with rs853560[chr6:110863247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More