EnhancerDB
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  3. rs853561[chr6:110863127]
Enhancers that have rs853561[chr6:110863127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs853561[chr6:110863127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110863107 110863127 RREB1 JASPAR yes 104296055
chr6 110863109 110863129 RREB1 JASPAR yes 104296056
chr6 110863114 110863134 RREB1 JASPAR yes 104296057
chr6 110863123 110863137 GATA2 JASPAR yes 104296058
chr6 110863127 110863135 GATA3 JASPAR yes 104296059
Genes associated with rs853561[chr6:110863127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More