EnhancerDB
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  3. rs854890[chr12:47474826]
Enhancers that have rs854890[chr12:47474826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47474423 47475249 vista13262
VISTA
chr12 47474705 47484575 enh29558
Large Intestine Ovary Esophagus Astrocyte Muscle (A673) Uterus Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs854890[chr12:47474826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47472453 47474915 POLR2A UCSC Txn Factor no Conserved 108028316
chr12 47474288 47474944 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028330
chr12 47474406 47474982 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028335
chr12 47474427 47474867 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108028336
chr12 47474431 47474895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028337
chr12 47474471 47474875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028338
chr12 47474478 47474834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028339
chr12 47474488 47474992 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028340
chr12 47474491 47474841 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028341
chr12 47474515 47474899 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21543081
chr12 47474515 47474899 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108028343
chr12 47474516 47474896 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028344
chr12 47474516 47474945 E2F1 UCSC Txn Factor no Conserved 108028345
chr12 47474529 47474839 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21543082
chr12 47474529 47474839 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108028346
chr12 47474533 47474857 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028347
chr12 47474540 47474916 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108028348
chr12 47474552 47474828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028351
chr12 47474561 47474827 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028352
chr12 47474563 47474827 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028353
chr12 47474630 47474945 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21543083
chr12 47474630 47474945 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108028356
chr12 47474704 47475108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028357
chr12 47474785 47475350 TCF7L2 GTRD no Colon (HCT116) 108028358
chr12 47474804 47475233 ZNF143 GTRD no Epithelial (MCF-7) 21543084
chr12 47474804 47475233 ZNF143 GTRD no Epithelial (MCF-7) 108028359
Genes associated with rs854890[chr12:47474826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 47473386 47630443 + PCED1B ENSG00000179715.8 47473386 0 Heart 0.225332 11979