EnhancerDB
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  3. rs868194[chr17:55681549]
Enhancers that have rs868194[chr17:55681549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs868194[chr17:55681549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55681294 55681584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773650
chr17 55681294 55681584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274208
chr17 55681394 55681654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773651
chr17 55681394 55681654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274209
chr17 55681456 55681650 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773652
chr17 55681456 55681650 RUNX3 UCSC Txn Factor no Conserved 108274210
chr17 55681456 55681650 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274211
chr17 55681465 55681669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773653
chr17 55681465 55681669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274212
chr17 55681531 55681552 IRF1 JASPAR yes 54974210
chr17 55681547 55681551 TEAD2 TRANSFAC yes 54974214
chr17 55681547 55681552 TBP TRANSFAC yes 54974215
chr17 55681547 55681553 TFIID TRANSFAC yes 54974216
Genes associated with rs868194[chr17:55681549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More