EnhancerDB
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  3. rs873260[chr1:201563914]
Enhancers that have rs873260[chr1:201563914]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs873260[chr1:201563914]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201563059 201564428 ZNF143 GTRD no Epithelial (MCF-7) 21365131
chr1 201563599 201564259 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365132
chr1 201563606 201564136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365133
chr1 201563614 201564130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365134
chr1 201563662 201564182 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365135
chr1 201563764 201564088 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365136
chr1 201563774 201564118 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365137
chr1 201563783 201564101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365138
chr1 201563788 201564107 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365139
chr1 201563794 201564084 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365140
chr1 201563796 201564091 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21365141
Genes associated with rs873260[chr1:201563914], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More