EnhancerDB
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  3. rs879517827[chr18:56218342]
Enhancers that have rs879517827[chr18:56218342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs879517827[chr18:56218342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56218327 56218345 SRF JASPAR yes 110957932
chr18 56218329 56218344 MEF2C JASPAR yes 110957933
chr18 56218329 56218350 IRF1 JASPAR yes 110957934
chr18 56218330 56218351 IRF1 JASPAR yes 110957935
chr18 56218336 56218351 FOXP1 JASPAR yes 110957936
chr18 56218337 56218347 NFATC3 JASPAR yes 110957937
chr18 56218338 56218359 IRF1 JASPAR yes 110957938
chr18 56218339 56218346 NFATC2 JASPAR yes 110957939
chr18 56218342 56218357 STAT2 JASPAR yes 110957940
Genes associated with rs879517827[chr18:56218342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More