EnhancerDB
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  3. rs885539[chr2:236416245]
Enhancers that have rs885539[chr2:236416245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs885539[chr2:236416245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236416235 236416247 PROX1 JASPAR yes 81975641
chr2 236416235 236416252 NR3C1 JASPAR yes 81975642
chr2 236416235 236416252 NR3C2 JASPAR yes 81975643
chr2 236416245 236416265 ESR1 JASPAR yes 81975644
Genes associated with rs885539[chr2:236416245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More