EnhancerDB
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  3. rs893965[chr1:23085880]
Enhancers that have rs893965[chr1:23085880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs893965[chr1:23085880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23085866 23085881 SCRT1 JASPAR yes 27389590
chr1 23085879 23085889 HOXA13 JASPAR yes 27389592
chr1 23085879 23085890 HOXA10 JASPAR yes 27389593
chr1 23085880 23085889 CDX1 JASPAR yes 27389594
chr1 23085880 23085891 CDX2 JASPAR yes 27389595
Genes associated with rs893965[chr1:23085880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More