EnhancerDB
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Enhancers that have rs9303409[chr17:57511924]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57510669 57520490 enh4503
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Lung Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
chr17 57511883 57511981 vista25331
VISTA
Transcript factors that have rs9303409[chr17:57511924]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57510668 57512232 ZNF143 GTRD no Epithelial (MCF-7) 21775065
chr17 57510668 57512232 ZNF143 GTRD no Epithelial (MCF-7) 108276022
chr17 57510694 57512036 ZNF143 GTRD no Epithelial (MCF-7) 21775066
chr17 57510694 57512036 ZNF143 GTRD no Epithelial (MCF-7) 108276023
chr17 57510722 57512253 ZNF143 GTRD no Epithelial (MCF-7) 21775067
chr17 57510722 57512253 ZNF143 GTRD no Epithelial (MCF-7) 108276024
chr17 57510806 57512045 ZNF143 GTRD no Epithelial (MCF-7) 21775068
chr17 57510806 57512045 ZNF143 GTRD no Epithelial (MCF-7) 108276025
chr17 57510819 57512902 ZNF143 GTRD no Epithelial (MCF-7) 21775069
chr17 57510819 57512902 ZNF143 GTRD no Epithelial (MCF-7) 108276026
chr17 57510819 57512902 ZNF143 GTRD no Epithelial (MCF-7) 108276027
chr17 57510857 57512246 ZNF143 GTRD no Epithelial (MCF-7) 21775070
chr17 57510857 57512246 ZNF143 GTRD no Epithelial (MCF-7) 108276028
chr17 57511791 57512686 ZBTB33 GTRD no Lung (A549) 108276030
chr17 57511791 57512686 ZBTB33 GTRD no Lung (A549) 108276031
chr17 57511903 57511924 IRF1 JASPAR yes 21264356
chr17 57511903 57511924 IRF1 JASPAR yes 55059902
chr17 57511923 57511935 YY1 JASPAR yes 21264357
chr17 57511923 57511935 YY1 JASPAR yes 55059903
Genes associated with rs9303409[chr17:57511924], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 57642886 57685706 + DHX40 ENSG00000108406.5 57642886 130962 Lung 0.00746933 16103