EnhancerDB
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  3. rs9427471[chr1:202005537]
Enhancers that have rs9427471[chr1:202005537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs9427471[chr1:202005537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005273 202006678 ZNF143 GTRD no Epithelial (MCF-7) 21365534
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202005488 202006663 ZNF274 GTRD no Cervix (HeLa-S3) 21365536
chr1 202005522 202006664 ZNF143 GTRD no Epithelial (MCF-7) 21365537
chr1 202005529 202005538 JDP2 JASPAR yes 34544470
chr1 202005537 202005552 FOXP1 JASPAR yes 34544471
Genes associated with rs9427471[chr1:202005537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More