EnhancerDB
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  3. rs9427472[chr1:202008917]
Enhancers that have rs9427472[chr1:202008917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs9427472[chr1:202008917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202006897 202008937 ZNF274 GTRD no Bone Marrow (K562) 107857427
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 21365578
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 107857430
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 21365579
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 107857436
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 21365583
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 107857447
chr1 202007883 202009228 ZNF143 GTRD no Epithelial (MCF-7) 21365601
chr1 202007883 202009228 ZNF143 GTRD no Epithelial (MCF-7) 107857479
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 21365608
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 107857492
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 21365624
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 107857517
chr1 202008702 202009113 TCF7L2 GTRD no Colon (HCT116) 21365633
chr1 202008848 202011124 ZNF143 GTRD no Epithelial (MCF-7) 21365634
chr1 202008912 202011549 ZNF143 GTRD no Epithelial (MCF-7) 21365635
chr1 202008912 202011625 ZNF274 GTRD no Cervix (HeLa-S3) 21365636
chr1 202008915 202008919 NFE TRANSFAC yes 34545044
Genes associated with rs9427472[chr1:202008917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More