EnhancerDB
  1. Home
  2. SNP
  3. rs9427718[chr1:202015940]
Enhancers that have rs9427718[chr1:202015940]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs9427718[chr1:202015940]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202014792 202019513 ZBTB33 GTRD no Lung (A549) 107857533
chr1 202014810 202019522 ZBTB33 GTRD no Lung (A549) 107857534
chr1 202014811 202019498 ZBTB33 GTRD no Lung (A549) 107857535
chr1 202014820 202019524 ZBTB33 GTRD no Lung (A549) 107857536
chr1 202014830 202016614 ZBTB33 GTRD no Lung (A549) 107857537
chr1 202014841 202019498 ZBTB33 GTRD no Lung (A549) 107857538
chr1 202014863 202020026 ZBTB33 GTRD no Lung (A549) 107857539
chr1 202015152 202019509 ZBTB33 GTRD no Lung (A549) 107857540
chr1 202015381 202019529 ZBTB33 GTRD no Lung (A549) 107857541
chr1 202015415 202019526 ZBTB33 GTRD no Lung (A549) 107857542
chr1 202015533 202019697 ZBTB33 GTRD no Lung (A549) 107857543
chr1 202015614 202016304 TCF7L2 GTRD no Colon (HCT116) 21365796
chr1 202015614 202016304 TCF7L2 GTRD no Colon (HCT116) 107857544
chr1 202015721 202016477 ZNF143 GTRD no Epithelial (MCF-7) 21365798
chr1 202015721 202016477 ZNF143 GTRD no Epithelial (MCF-7) 107857545
chr1 202015747 202016689 ZNF274 GTRD no Liver (HepG2) 21365799
chr1 202015747 202016689 ZNF274 GTRD no Liver (HepG2) 107857546
chr1 202015806 202016706 P63 GTRD no Skin (Keratinocyte) 107857547
chr1 202015843 202016587 P63 GTRD no Skin (Keratinocyte) 107857548
chr1 202015848 202016498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365800
chr1 202015848 202016498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857549
chr1 202015855 202016630 ZNF143 GTRD no Epithelial (MCF-7) 21365801
chr1 202015855 202016630 ZNF143 GTRD no Epithelial (MCF-7) 107857550
chr1 202015887 202016547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365802
chr1 202015887 202016547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857551
chr1 202015893 202016493 ZBTB33 GTRD no Lung (A549) 107857552
chr1 202015910 202016990 ZNF274 GTRD no Bone Marrow (K562) 107857553
chr1 202015920 202016330 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857554
chr1 202015926 202016390 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21365803
chr1 202015926 202016390 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107857555
chr1 202015940 202015959 CTCF JASPAR yes 34546226
Genes associated with rs9427718[chr1:202015940], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More