EnhancerDB
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  3. rs9470854[chr6:12047238]
Enhancers that have rs9470854[chr6:12047238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12042640 12055275 enh8953
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs9470854[chr6:12047238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12047230 12047242 PKNOX1 JASPAR yes 99940183
chr6 12047230 12047242 TGIF1 JASPAR yes 99940184
chr6 12047230 12047242 TGIF2 JASPAR yes 99940185
chr6 12047231 12047240 SNAI2 JASPAR yes 99940186
chr6 12047231 12047241 FIGLA JASPAR yes 99940187
chr6 12047231 12047241 ID4 JASPAR yes 99940188
chr6 12047231 12047241 TCF3 JASPAR yes 99940189
chr6 12047231 12047241 TCF4 JASPAR yes 99940190
Genes associated with rs9470854[chr6:12047238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 463481 Spleen 0.262605 6160