EnhancerDB
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  3. rs9477509[chr6:17727117]
Enhancers that have rs9477509[chr6:17727117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs9477509[chr6:17727117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17727113 17727123 HOXA13 JASPAR yes 100397974
chr6 17727113 17727123 HOXB13 JASPAR yes 100397975
chr6 17727113 17727123 HOXD13 JASPAR yes 100397976
chr6 17727115 17727119 TEAD2 TRANSFAC yes 100397977
chr6 17727115 17727120 TBP TRANSFAC yes 100397978
chr6 17727115 17727121 TFIID TRANSFAC yes 100397979
Genes associated with rs9477509[chr6:17727117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More